remove src/protein/

2 files changed, 0 insertions, 39 deletions

diff --git a/src/protein/protein.js b/src/protein/protein.js
deleted file mode 100644
index 0223203..0000000
--- a/src/protein/protein.js
+++ /dev/null
@@ -1,10 +0,0 @@
-const xnor = (a, b) => a === b ? 1 : 0;
-
-export function compare(pa, pb) {
-	if (pa.length !== pb.length) {
-		throw new Error(`attempted to compare proteins with different lengths: ${pa.length} vs ${pb.length}`);
-	}
-	return (1/pa.length) * pa
-		.map((_, i) => xnor(pa[i], pb[i]))
-		.reduce((acc, val) => acc + val, 0)
-}
diff --git a/src/protein/protein.test.js b/src/protein/protein.test.js
deleted file mode 100644
index 61c4896..0000000
--- a/src/protein/protein.test.js
+++ /dev/null
@@ -1,29 +0,0 @@
-'use strict';
-
-import { compare } from './protein';
-
-test('compare size-1 proteins', () => {
-	expect(compare([0], [0])).toBe(1);
-	expect(compare([0], [1])).toBe(0);
-	expect(compare([1], [0])).toBe(0);
-	expect(compare([1], [1])).toBe(1);
-});
-
-
-test('compare larger proteins', () => {
-	expect(compare([0,0], [0,0])).toBe(1);
-	expect(compare([1,1], [1,1])).toBe(1);
-	expect(compare([0,1], [1,1])).toBeCloseTo(0.5);
-	expect(compare([0,1,0], [1,1,1])).toBeCloseTo(1/3);
-	expect(compare([0,1,0,1], [1,1,1,1])).toBeCloseTo(0.5);
-	expect(compare([0,1,0,1], [0,1,1,1])).toBeCloseTo(0.75);
-	expect(compare([0,1,0,1], [0,1,1,0])).toBeCloseTo(0.5);
-	expect(compare([0,1,0,0], [0,1,1,0])).toBeCloseTo(0.75);
-	expect(compare([0,1,1,0], [0,1,1,0])).toBeCloseTo(1);
-});
-
-
-test('comparisons between differently-sized proteins throw', () => {
-	expect(() => compare([0], [0, 0])).toThrow();
-	expect(() => compare([0, 0], [0])).toThrow();
-});