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'use strict';
import { network } from '../mind/topology';
// check if a given genome is valid and compute its size
export function get_size(num_input, num_output, genome) {
const [ max_index, max_weight ] = genome.reduce(
([max_index, max_weight ], [ source, sink, weight]) => [
Math.max(max_index, source, sink),
Math.max(max_weight, Math.abs(weight)),
],
[ 0, 0 ]
);
if (max_index < num_input + num_output - 1) {
return -1;
}
else if (max_weight > 4.0) {
return -1;
}
else {
return max_index + 1;
}
}
export function parse_genome(num_input, num_output, genome) {
const size = get_size(num_input, num_output, genome);
if (size < 0) {
// bad genome
throw new Error('invalid genome sequence!');
}
const n = genome.reduce(
(acc, [source, sink, weight]) => acc.connect(source, sink, weight),
network(num_input, size-num_input-num_output, num_output)
);
return n;
}
// --===== mutations =====--
function clamp(value, min, max) {
if (value > max) { return max; }
if (value < min) { return min; }
return value;
}
export function mut_gene_source(n_input, n_internal, n_output, gene, r) {
const [source, sink, weight] = gene;
const new_source = r < 0.5 ? source-1 : source+1;
return [
clamp(new_source, 0, n_input+n_internal-1),
sink,
weight,
];
}
export function mut_gene_sink(n_input, n_internal, n_output, gene, r) {
const [source, sink, weight] = gene;
const new_sink = r < 0.5 ? sink-1 : sink+1;
return [
source,
clamp(new_sink, n_input+n_internal, n_input+n_internal+n_output-1),
weight,
];
}
export function mut_gene_weight(weight_max, gene, r) {
const [source, sink, weight] = gene;
const rr = (2*r)-1;
const move = weight_max * rr;
const new_weight = (2*weight + move)/3;
return [
source,
sink,
clamp(new_weight, -weight_max, weight_max),
];
}
export function mut_genome_expand(
[n_input, n_internal, n_output, genome], r
) {
const expand_index = Math.floor(n_internal * r) + n_input;
const new_genome = genome.map(([source, sink, weight]) => [
source >= expand_index ? source+1 : source,
sink >= expand_index ? sink+1 : sink,
weight,
]);
return [
n_input, n_internal+1, n_output, new_genome,
];
}
export function mut_genome_contract(
[n_input, n_internal, n_output, genome], r
) {
const contract_idx = Math.floor(n_internal * r) + n_input;
const new_source = (source) => source >= contract_idx ? source-1 : source;
const new_sink = (sink) => sink > contract_idx ? sink-1 : sink;
const new_genome = genome.map(([source, sink, weight]) => [
new_source(source),
new_sink(sink),
weight,
]);
return [
n_input, n_internal-1, n_output, new_genome
];
}
export function mut_genome_insert(
[n_input, n_internal, n_output, genome],
weight_max,
r1, r2, r3
) {
const source = Math.floor((n_input + n_internal) * r1);
const sink = Math.floor((n_internal + n_output) * r2) + n_input;
const weight = weight_max * ((2*r3)-1);
return [
n_input, n_internal, n_output,
[...genome, [source, sink, weight]],
];
}
export function mut_genome_delete(
[n_input, n_internal, n_output, genome], r
) {
const del_idx = Math.floor(r * genome.length);
const new_genome = genome.filter((_, idx) => idx != del_idx);
return [n_input, n_internal, n_output, new_genome];
}
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